Publications which have contributed to EpimiRBase:

[1] WA Alsharafi and B Xiao. Dynamic expression of microRNAs (183, 135a, 125b, 128, 30c and 27a) in the rat pilocarpine model and temporal lobe epilepsy patients. CNS & Neurological Disorders Drug Targets, 2015.

[2] E Aronica, K Fluiter, A Iyer, E Zurolo, J Vreijling, EA Van Vliet, JC Baayen, and JA Gorter. Expression pattern of miR-146a, an inflammation-associated microRNA, in experimental and human temporal lobe epilepsy. European Journal of Neuroscience, 31(6):1100–1107, 2010.

[3] Muhammad Usman Ashhab, Ahmed Omran, Huimin Kong, Na Gan, Fang He, Jing Peng, and Fei Yin. Expressions of tumor necrosis factor alpha and microRNA-155 in immature rat model of status epilepticus and children with mesial temporal lobe epilepsy. Journal of Molecular Neuroscience, 51(3):950–958, 2013.

[4] Anna Maria Bot, Konrad Jozef Debski, and Katarzyna Lukasiuk. Alterations in miRNA levels in the dentate gyrus in epileptic rats. PloS One, 8(10), 2013.

[5] Jan A Gorter, Anand Iyer, Ian White, Anna Colzi, Erwin A van Vliet, Sanjay Sisodiya, and Eleonora Aronica. Hippocampal subregion-specific microRNA expression during epileptogenesis in experimental temporal lobe epilepsy. Neurobiology of Disease, 62:508–520, 2014.

[6] Kai Hu, Yuan-Yuan Xie, Chen Zhang, Dong-Sheng Ouyang, Hong-Yu Long, Dan-Ni Sun, Li-Li Long, Li Feng, Yi Li, and Bo Xiao. MicroRNA expression profile of the hippocampus in a rat model of temporal lobe epilepsy and miR-34a-targeted neuroprotection against hippocampal neurone cell apoptosis post-status epilepticus. BMC Neuroscience, 13(1):115, 2012.

[7] Kai Hu, Chen Zhang, Lili Long, Xiaoyan Long, Li Feng, Yi Li, and Bo Xiao. Expression profile of microRNAs in rat hippocampus following lithium– pilocarpine-induced status epilepticus. Neuroscience Letters, 488(3):252– 257, 2011.

[8] Yunyi Huang, Jing Guo, Qian Wang, and Yangmei Chen. MicroRNA-132 silencing decreases the spontaneous recurrent seizures. International Journal of Clinical and Experimental Medicine, 7(7):1639, 2014.

[9] Guohui Jiang, Ruijiao Zhou, Xuzhi He, Zhiqing Shi, Min Huang, Jumin Yu, and Xiaoming Wang. Expression levels of microRNA-199 and hypoxia-inducible factor-1 alpha in brain tissue of patients with intractable epilepsy. International Journal of Neuroscience, (0):1–29, 2014.

[10] Eva M Jimenez-Mateos, Isabella Bray, Amaya Sanz-Rodriguez, Tobias Engel, Ross C McKiernan, Genshin Mouri, Katsuhiro Tanaka, Takanori Sano, Julie A Saugstad, Roger P Simon, et al. miRNA Expression profile after status epilepticus and hippocampal neuroprotection by targeting miR-132. The American Journal of Pathology, 179(5):2519–2532, 2011.

[11] Eva M Jimenez-Mateos, Tobias Engel, Paula Merino-Serrais, Isabel Fernaud-Espinosa, Natalia Rodriguez-Alvarez, James Reynolds, Cristina R Reschke, Ronan M Conroy, Ross C McKiernan, David C Henshall, et al. Antagomirs targeting microRNA-134 increase hippocampal pyramidal neuron spine volume in vivo and protect against pilocarpine-induced status epilepticus. Brain Structure and Function, pages 1–13, 2014.

[12] Eva M Jimenez-Mateos, Tobias Engel, Paula Merino-Serrais, Ross C McKiernan, Katsuhiro Tanaka, Genshin Mouri, Takanori Sano, Colm O’Tuathaigh, John L Waddington, Suzanne Prenter, et al. Silencing microRNA-134 produces neuroprotective and prolonged seizure-suppressive effects. Nature Medicine, 18(7):1087–1094, 2012.

[13] Sanne S Kaalund, Morten T Venø, Mads Bak, Rikke S Møller, Henning Laursen, Flemming Madsen, Helle Broholm, Bjørn Quistorff, Peter Uldall, Niels Tommerup, et al. Aberrant expression of miR-218 and miR-204 in human mesial temporal lobe epilepsy and hippocampal sclerosisConvergence on axonal guidance. Epilepsia, 55(12):2017–2027, 2014.

[14] Anne A Kan, Susan van Erp, Alwin AHA Derijck, Marina de Wit, Ellen VS Hessel, Eoghan ODuibhir, Wilco de Jager, Peter C Van Rijen, Peter H Gosselaar, Pierre NE de Graan, et al. Genome-wide microRNA profiling of human temporal lobe epilepsy identifies modulators of the immune response. Cellular and Molecular Life Sciences, 69(18):3127–3145, 2012.

[15] Anita Kretschmann, Benedicte Danis, Lidija Andonovic, Khalid Abnaof, Marijke van Rikxoort, Franziska Siegel, Manuela Mazzuferi, Patrice Godard, Etienne Hanon, Holger Fr ̈ohlich, et al. Different microRNA profiles in chronic epilepsy versus acute seizure mouse models. Journal of Molecular Neuroscience, 55(2):466–479, 2015.

[16] Meng-Meng Li, Teng Jiang, Zhen Sun, Qun Zhang, Chen-Chen Tan, Jin-Tai Yu, and Lan Tan. Genome-wide microRNA expression profiles in hippocampus of rats with chronic temporal lobe epilepsy. Scientific Reports, 4, 2014.

[17] Da-Zhi Liu, Yingfang Tian, Bradley P Ander, Huichun Xu, Boryana S Stamova, Xinhua Zhan, Renee J Turner, Glen Jickling, and Frank R Sharp. Brain and blood microRNA expression profiling of ischemic stroke, intracerebral hemorrhage, and kainate seizures. Journal of Cerebral Blood Flow & Metabolism, 30(1):92–101, 2010.

[18] Ross C McKiernan, Eva M Jimenez-Mateos, Isabella Bray, Tobias Engel, Gary P Brennan, Takanori Sano, Zuzanna Michalak, Catherine Moran, Norman Delanty, Michael Farrell, et al. Reduced mature microRNA levels in association with dicer loss in human temporal lobe epilepsy with hippocampal sclerosis. PLoS One, 7(5):e35921, 2012.

[19] Ross C McKiernan, Eva M Jimenez-Mateos, Takanori Sano, Isabella Bray, Raymond L Stallings, Roger P Simon, and David C Henshall. Expression profiling the microRNA response to epileptic preconditioning identifies miR-184 as a modulator of seizure-induced neuronal death. Experimental Neurology, 237(2):346–354, 2012.

[20] Suzanne FC Miller-Delaney, Kenneth Bryan, Sudipto Das, Ross C McKiernan, Isabella M Bray, James P Reynolds, Ryder Gwinn, Raymond L Stallings, and David C Henshall. Differential DNA methylation profiles of coding and non-coding genes define hippocampal sclerosis in human temporal lobe epilepsy. Brain, 373, 2014.

[21] Jangsup Moon, Soon-Tae Lee, Jiye Choi, Keun-Hwa Jung, Hyunwoo Yang, Arshi Khalid, Jeong-Min Kim, Kyung-Il Park, Jung-Won Shin, Jae-Jun Ban, et al. Unique behavioral characteristics and microRNA signatures in a drug resistant epilepsy model. PloS One, 9(1), 2014.

[22] Jing Peng, Ahmed Omran, Muhammad Usman Ashhab, Huimin Kong, Na Gan, Fang He, and Fei Yin. Expression patterns of miR-124, miR-134, miR-132, and miR-21 in an immature rat model and children with mesial temporal lobe epilepsy. Journal of Molecular Neuroscience, 50(2):291–297, 2013.

[23] Israel Pichardo-Casas, Loyal A Goff, Mavis R Swerdel, Alejandro Athie, Jonathan Davila, Mariana Ramos-Brossier, Martha Lapid-Volosin, Wilma J Friedman, Ronald P Hart, and Luis Vaca. Expression profiling of synaptic microRNAs from the adult rat brain identifies regional differences and seizure-induced dynamic modulation. Brain Research, 1436:20– 33, 2012.

[24] Rashmi M Risbud and Brenda E Porter. Changes in microRNA expression in the whole hippocampus and hippocampal synaptoneurosome fraction following pilocarpine induced status epilepticus. PLoS One, 8(1):e53464, 2013.

[25] Takanori Sano, JP Reynolds, Eva M Jimenez-Mateos, S Matsushima, W Taki, and David C Henshall. MicroRNA-34a upregulation during seizure-induced neuronal death. Cell Death & Disease, 3(3):e287, 2012.

[26] Yi-jun Song, Xiao-bing Tian, Shu Zhang, Ya-xi Zhang, Xin Li, Dai Li, Yan Cheng, Jiang-nin Zhang, Chu-sheng Kang, and Wen Zhao. Temporal lobe epilepsy induces differential expression of hippocampal miRNAs including let-7e and miR-23a/b. Brain Research, 1387:134–140, 2011.

[27] Chan Lek Tan, Joshua L Plotkin, Morten T Venø, Melanie von Schimmelmann, Philip Feinberg, Silas Mann, Annie Handler, Jørgen Kjems, D James Surmeier, D ́ onal OCarroll, et al. MicroRNA-128 governs neuronal excitability and motor behavior in mice. Science, 342(6163):1254–1258, 2013.

[28] Jun Wang, Lan Tan, Lin Tan, Yan Tian, Jing Ma, Chen-Chen Tan, Hui-Fu Wang, Ying Liu, Meng-Shan Tan, Teng Jiang, et al. Circulating microRNAs are promising novel biomarkers for drug-resistant epilepsy. Scientific Reports, 5, 2015.

[29] Jun Wang, Jin-Tai Yu, Lin Tan, Yan Tian, Jing Ma, Chen-Chen Tan, Hui-Fu Wang, Ying Liu, Meng-Shan Tan, Teng Jiang, et al. Genome-wide circulating microRNA expression profiling indicates biomarkers for epilepsy. Scientific Reports, 5, 2015.

[30] Honghua Zheng, Rong Tang, Yi Yao, Zhilin Ji, Yuanyuan Cao, Zhaoji Liu, Feng Peng, Wenjie Wang, Dan Can, Huiqin Xing, et al. MiR-219 Protects Against Seizure in the Kainic Acid Model of Epilepsy. Molecular Neurobiology, pages 1–7, 2014.

[31] Zucchini, Silvia, Gianluca Marucci, Beatrice Paradiso, Giovanni Lanza, Paolo Roncon, Pierangelo Cifelli, Manuela Ferracin et al. Identification of miRNAs differentially expressed in human epilepsy with or without granule cell pathology. PLoS One, 9(8): e105521 2014.

[32] Roncon, Paolo, Marie Soukupovà, Anna Binaschi, Chiara Falcicchia, Silvia Zucchini, Manuela Ferracin, Sarah R. Langley et al. “MicroRNA profiles in hippocampal granule cells and plasma of rats with pilocarpine-induced epilepsy–comparison with human epileptic samples.” Scientific reports 5 2015.

[33] Schouten, Marijn, Silvina A. Fratantoni, Chantal J. Hubens, Sander R. Piersma, Thang V. Pham, Pascal Bielefeld, Rob A. Voskuyl, Paul J. Lucassen, Connie R. Jimenez, and Carlos P. Fitzsimons. “MicroRNA-124 and-137 cooperativity controls caspase-3 activity through BCL2L13 in hippocampal neural stem cells.” Scientific reports 5 2015.

[34] Jimenez-Mateos, Eva M., Marina Arribas-Blazquez, Amaya Sanz-Rodriguez, Caoimhin Concannon, Luis A. Olivos-Ore, Cristina R. Reschke, Claire M. Mooney et al. “microRNA targeting of the P2X7 purinoceptor opposes a contralateral epileptogenic focus in the hippocampus.” Scientific reports 5 (2015)